Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQLVSFKIQGIMKRIFMGANTLERFLSDENGAINDTLKRRMLSEFLLANPHVLLVSAIYTNNNERMITAMNMDSKIAYPNTALNENMTNQIHSLK--SITRSDPYYKEVNGDKIYGMDITLPLMGKNQNVIGALNFFLNIDAFYTDVV---GKKKSNTFLMGKDGRILINPNREIQDKILSAINPDKRVAKAVEYYN-QNEAGTLSYHSLSGNTETFLAIQPFDFFEEKGNNGNHWRWAIGKYVNKSLVFKEATNTKFIIITTLILGVLVLAFLVFIIISNLITKRISRVNNTLNDFFNLLNNPKNNHAISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVTNYVENGDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGADIESLNNALEHYKNLDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLEEITNIITMIDSKSQEMISQGEDIKSVVDMIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDILEDVSKKKF |
| 3LIF Chain:A ((6-246)) | ---------------------------------HKIALAQSETEMRNLSHSLAEHATHTFQGADVVLDDIVSFMKWRP--HPSPVFNERLRALADNLPQL-SDVAILDADGQLTYASVKPV----PALDNSDRSYFRYHRANDDHTLLITGPIQSRTSG--VWVFVVSRRLETTDGKFFGVVVATIESEYFSTFYKTFDLGPGGSISLLHSDGRLLIQWPSLQTGRDMAN---M----VLFQKALPRSPDGYYLTVSPFDGLTKYLAYRRVS----------RYPLVVTVARTEDSVLSG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78537 for 1872 contacts (-42.0/contact) +
2D Compatibility (PS) -25149 + (NN) -10009 + (LL) 32744
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -85301.0 ( -45.57 by residue)
QMean score : 0.396
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