Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK--
2IMU Chain:A ((1-46))
FGFKDIIRAIRRIAVPVVSTL------------------FPPAAPLAHAIGEGVDYLLGDEAQA
General information:
TITO was launched using:
RESULT:
Template:
2IMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5113 for 187 contacts (-27.3/contact) +
2D Compatibility (PS) -4856 + (NN) -4427 + (LL) 2368
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -15278.0 ( -81.70 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2IMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IMU-query.scw
PDB file :
Tito_Scwrl_2IMU.pdb
: