Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKQILTILTPFFVATLLYFLGAPDGLNPNAWLYFCIFMG----MIIGLILEPVPSGLIALSALVPCIALKIGASSEVASANKAISWGLSGYANK-TVWLVFVAFILGLGYEKSLLGKRIALLLIRFLGQTPLGLGYAIGLSELCLAPFIPSNSARSGGILYPIVSSIPPLMGSTPSNNPDKIGAYLMWVALASTCITSSMFLTALAPNPLAMEIATKMGVNEISWFSWFLAFLPCGVVLILLVPLLAYKTCKPTLKGSKEVSLWAKKELESMGRFSLKEILMLSLTLLALLGWIFGKSLGLHASATALIVMVLMAFCKIVSYEDIIKNKSAFNIFLLLGSLLTMAGGLKNVGFLNFIGNAAQNFLEHAHLDPLIAVLFIVALFYLS--HYFFASITAHVSALFALFVGIGSHIQGVNLQE-LSLFLMLSLGIMGILTPYGTGPSTIYYGSGYIQSKDFWKWGFIFGFLYLIVFLSVCAPWVKFIAYRWL |
| 1HRK Chain:A ((1-359)) | ---------RKPKTGILMLNMGGPET-LGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERD-------------GLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWP----------THHLLIQCFADHILKELDHFPLEKRSE-------------VVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQS----------------------------------------------------------------KV-GPMPWLGPQTDESIKGLCER-GRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPLCVNP-------------------VCRETKSFFTSQQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -316054 for 2955 contacts (-107.0/contact) +
2D Compatibility (PS) -36945 + (NN) -3209 + (LL) 12312
1D Compatibility (HY) -4400 + (ID) 2400
Total energy: -350696.0 ( -118.68 by residue)
QMean score : 0.247
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