Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKNFWPLGIMSVLIFGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPNIQVYLAFYPSQSQPRLLGTLDCKNACEPLKFDLLEGD---KVGRYKILFKFVFKNKEELILEQLAFFK |
2P9R Chain:A ((138-188)) | ------------------------------------------------------------------------------------------------------------------------------LIPL--VYIQDPKGNRIAQWQSF-QLEGGLKQFS-FPLSSEPFQGSYKVVVQKKS--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9502 for 229 contacts (-41.5/contact) +
2D Compatibility (PS) -4627 + (NN) 1770 + (LL) 9968
1D Compatibility (HY) 1200 + (ID) 200
Total energy: -1391.0 ( -6.07 by residue)
QMean score : 0.499
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