Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKE------ELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDL-------IDKIEKMLLIDEDKKSPIHV-----SSSNYIIEADFELFAIALKNMIDNAIKYSDDKQVF---LDFIGNNLVVSNKSKPL---KEDFEKYLQPYFKSSNPSQAH-GFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 4U7O Chain:A ((25-257)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTEQ-QKIDNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFD-MILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDK----QGGTGLGLAISKEVVQMLG---------GRIWVDSVEGKGSTFYISLPYE------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65781 for 1238 contacts (-53.1/contact) +
2D Compatibility (PS) -22413 + (NN) -11955 + (LL) 18356
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -95843.0 ( -77.42 by residue)
QMean score : 0.351
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