Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSLFGARKAMIS-A-AAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGNLLKFIPQS-VMYGFVNALGILLLTEQFKFLQNQNLGVFVLLAIGILIIYLFPLITKKIPSNLICILAVS-AIALIFDTHAPNLGSIEQGVSGFHFIIIPKNLDFKMVLGLLPYALSLALVGTIESLLTAKTLDVILKDGVS-DKNKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAVVAVMVIISFTTFNFQSIMNIKTIKL-YDTLNMLLVVAVVLYTHNLAIGVVVGVLINALWIKFKGMG |
| 1T98 Chain:A ((8-281)) | ---------------------------VPELVAWARKNDFSISL---PVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVSDAFEQTSETIGVRANNAIN-----------------DMVRQRLLNRFTIYRLT---------------PLGIGITDYYI--------RQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRN--------VYAPLKYS-------------VAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNK-------------DWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDA---------------------TMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185409 for 1666 contacts (-111.3/contact) +
2D Compatibility (PS) -25519 + (NN) -3979 + (LL) 10788
1D Compatibility (HY) 13200 + (ID) 1200
Total energy: -192119.0 ( -115.32 by residue)
QMean score : 0.208
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