Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEKRLKAIQNKIASWIKEIESGFIDALFSKIGP--SKMLRSKLMLALLDEKTDAI-LLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMGES-IAQALSNAVLRLSRGE-IEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLNKDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQDSHEIIEWTKEKFKQHGII---EETLKIAQVYSKKALEAIKGENNLILEKLAQDVIYRTF |
| 1V4J Chain:A ((15-273)) | -----------KVKERIEQILSQFFPEQIMKDLPLYGKMLRVRL--SILSFKNRGVEIGEDAISSLAALELYHLASLLHDDVIDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQLSRYKPIT--KEEYLRIVEGKSGALFGLALQLPALLEGELGEDLYNLGVTIGTIYQMFDDIMDFA-GMEKIGKDGFLDLKNGVASFPLVTAMEKFPEARQ----MFENRDWSGLMSFMREK----GILKECEETLKVLVKNVIIENSWLRDF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97736 for 1968 contacts (-49.7/contact) +
2D Compatibility (PS) -26938 + (NN) -14973 + (LL) 3624
1D Compatibility (HY) -21200 + (ID) 4050
Total energy: -161273.0 ( -81.95 by residue)
QMean score : 0.404
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