Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE
1GO4 Chain:E ((545-579))
---------MSLNPTSVARQR-LREDHSQLQAECERLRGLLRAME-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GO4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7023 for 133 contacts (52.8/contact) +
2D Compatibility (PS) -3906 + (NN) -3483 + (LL) 5532
1D Compatibility (HY) -400 + (ID) 450
Total energy: 4316.0 ( 32.45 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_1GO4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GO4-query.scw
PDB file :
Tito_Scwrl_1GO4.pdb
: