Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEKPGKIVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVLKIHHPSLNKKERLERVVYELERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQASAKELFADPRHPYTKALLNAIPKPGKEYRKKRLETVDENVDYLSFQKELR |
| 4YMV Chain:J ((8-239)) | ------------YKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKS-TLLRCINLLEEPTK---GEV-FI--DGVKINNGKVNINKVRQKVGMVFQH--FNLFPHLTAIENIT-LAPVKVKKMNKKEAEELAVDLLAKVGLL---DKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLAN-EGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKIL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126022 for 1875 contacts (-67.2/contact) +
2D Compatibility (PS) -25194 + (NN) -13026 + (LL) 3760
1D Compatibility (HY) -20800 + (ID) 4050
Total energy: -185332.0 ( -98.84 by residue)
QMean score : 0.445
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