Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISNISIHPKTMFKNALNIQDFSF--KNHTSTAIIGTNGAGKSTLINTILGI----RSDYNFKAQN-NNIPYHDNVIPQRKQLGVVSNLFNYPPGLNANDLFKFYQFFHKNCTLDLFEKNL---------------------LNKTYEHLSDGQKQRLKIDLALSHHPQLVIMDEPETSLEQNALIRLSNLI-SLRNTQQLTSIIATHD-PIVLDSCEWVLLLKNGNIAQYKPLNSILKSVAKTFNFKEKPTTKDLLALLKDI |
1Z47 Chain:A ((27-227)) | --------------GARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLP------PQKRNVGLVFQ--NYA-------LFQ-HMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74139 for 1253 contacts (-59.2/contact) +
2D Compatibility (PS) -18375 + (NN) -8269 + (LL) 1696
1D Compatibility (HY) -12800 + (ID) 2550
Total energy: -114437.0 ( -91.33 by residue)
QMean score : 0.414
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