Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHY--SVLKGLVEVVPVLNKPSMLRNHRGL---YGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSVDAVLHLHDGGGYY-RPVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELP-LESRVFYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKISSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
| 3NA6 Chain:A ((37-286)) | ----------------------VMIPITVIQNG-AGKTALLTGANHGDEYEGPVALQELAATTRAEDVTGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLL-PMADVAVDFHSGGKTLDFVPFAAAH----------ILEDK--------VLQDACFAAMQAFNAPYSVQ-----LL--E-----IDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQGEMQI-DPSVTLDMPDGDCYLFSEHDGL-FEI----MIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSGDCAAVIGVVE------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73254 for 1967 contacts (-37.2/contact) +
2D Compatibility (PS) -24425 + (NN) 4947 + (LL) 11184
1D Compatibility (HY) 400 + (ID) 1750
Total energy: -82898.0 ( -42.14 by residue)
QMean score : 0.323
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