Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELGNKNIKPGRKRVAVDELKRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSINCDSSSRL
1P94 Chain:A ((30-72))
------------------SSGKIKRVNVNFDEEKHTRFKAACARKGTSITDVVNQLVDNWLKENE----------------
General information:
TITO was launched using:
RESULT:
Template:
1P94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5750 for 188 contacts (-30.6/contact) +
2D Compatibility (PS) -4604 + (NN) -1276 + (LL) 1180
1D Compatibility (HY) -800 + (ID) 250
Total energy: -11500.0 ( -61.17 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_1P94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P94-query.scw
PDB file :
Tito_Scwrl_1P94.pdb
: