Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTIKSIPIRTFILLYKSSPKCVVLASITVLFVG-ILPSLNILV--MIKLIDIVVNLLQKHTHFEYSLLLPTLLLWGALLFLTHVFSGILSSLQTIIAEQFSINIITQLANKLTQVKNLNFFENKDHTIKLNTIHNGLHIRPLNY--VSNLFFNL-QRIIGLI-------SLFGILFSISIYLPFIMIFATVPCILISNHIAKKHSASIDKLQDQKESMQNYLYSGLDNQKNKDNLLFNFMLNFHHKFIETKELYLNNFVKVAQKNLIFTIYA------DVLITTLSIALFFLMV--FIILSKLIGVGAIAGYIQAFSSTQQQLQDLSFYGKWFFAINKYFENYFCILDYKIPKPETQIKLEEKI--HSITFENISFSYPNSK--LIFENFNLSLHSNKIYALVGKNASGKSTLINLLLGFY--TPNSGQIIINNKYPLQDLELNSYHQQMSAIFQDFSLYAGYSIDDNLFMQNNITKEQLKQKREILKSFDENFQNCLNDCNNTLFGAQYNGVDFSLGQKQRIATMRAFLKPSNCIVLDEPSSAIDPIME---KEFLDFIFKKSQSKMALIITHRMNSVKQANEIIVLDQGKLIEQGNFETLMK--KQGLFCELFLKQQY |
3WMF Chain:A ((16-595)) | ---------RIFALAWSSSATMIVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGET-WKYSVGFVGI---GVFEF---IVAGSRTALFGIASERLARDLRVAAFSNLVE-QDVTYFDRRKAGELGGKLNNDVQVIQYSFSKLGAVLFNLAQCVVGIIVAFIFAPALTGVLIALS---PLVVLAVVVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFFGLSML-VIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVG------QAAQVWPDVTRGLGAGGELFAMIDR-------VPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAY--SFVMALPDGLDTEVGER--GLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMM-ASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245867 for 3948 contacts (-62.3/contact) +
2D Compatibility (PS) -57909 + (NN) -29201 + (LL) 3348
1D Compatibility (HY) -36000 + (ID) 7250
Total energy: -372879.0 ( -94.45 by residue)
QMean score : 0.323
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