Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMAWGGLSSLE----GASHFVIYLARKGVTYDSDYVKKVMHEVKKRDYDTHSRFA------------QIIKNFQENDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAY--LEEKGYLNTAEFGVSVMASFGYRNQE----ITPKTRWKTEVIYEVIE
1YLR Chain:A ((3-207))-----IISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAM--DDVWLKLV---VDQEDAD--GRFATPEAKAANDKGRKFFADMHRKDLHDDAE-----WMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGYTSL------VVVPVGHHSVEDFNATLPKSRLPQNITLTEV-


General information:
TITO was launched using:
RESULT:

Template: 1YLR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55875 for 1316 contacts (-42.5/contact) +
2D Compatibility (PS) -20034 + (NN) -10129 + (LL) 1884
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -98704.0 ( -75.00 by residue)
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1YLR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YLR-query.scw
PDB file : Tito_Scwrl_1YLR.pdb: