Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIHIGVLSASDRASKGVYEDLSGKAIQEVL---SEYLLNPLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNIQAFRPKQ
1UUY Chain:A ((7-163))
----KVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLARSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK------------------
General information:
TITO was launched using:
RESULT:
Template:
1UUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102285 for 1303 contacts (-78.5/contact) +
2D Compatibility (PS) -16067 + (NN) -2578 + (LL) 1696
1D Compatibility (HY) -7200 + (ID) 3200
Total energy: -129634.0 ( -99.49 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1UUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UUY-query.scw
PDB file :
Tito_Scwrl_1UUY.pdb
: