Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPIKEENFFIKANGLKELRAILQEKEGLKEWLGVCAIALNDHLIDNLDMPLKDGDVISLLPPVCGG
3RPF Chain:D ((3-74))
-VEVRFFGPIKEENFFIK-----ELRAILQEKEGLKEWLGVCAIALNDHLID----PLKDGDVISLLPPVCGG
General information:
TITO was launched using:
RESULT:
Template:
3RPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42379 for 350 contacts (-121.1/contact) +
2D Compatibility (PS) -6837 + (NN) -2975 + (LL) 568
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -65573.0 ( -187.35 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_3RPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RPF-query.scw
PDB file :
Tito_Scwrl_3RPF.pdb
: