Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGG-----QITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAIQRVSKKGSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNSKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGLFIFVGYDVNNAVLKQEDNSMLCECDEYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH |
| 4A65 Chain:A ((6-314)) | --DVVIIGSGPAAHTAAIYLGRSSLK-PVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ-----VKTADDGYILTE-GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203620 for 2583 contacts (-78.8/contact) +
2D Compatibility (PS) -31976 + (NN) -6796 + (LL) 664
1D Compatibility (HY) -18800 + (ID) 5650
Total energy: -266178.0 ( -103.05 by residue)
QMean score : 0.534
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