Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEEGVREAIAKLDNTDFMGRTIRVTEANPKKS
4CH0 Chain:S ((13-86))
---IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKANVNLAYLGAK
General information:
TITO was launched using:
RESULT:
Template:
4CH0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51899 for 515 contacts (-100.8/contact) +
2D Compatibility (PS) -7731 + (NN) -220 + (LL) 192
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -64608.0 ( -125.45 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4CH0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CH0-query.scw
PDB file :
Tito_Scwrl_4CH0.pdb
: