Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------MFLVK------KIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPS-YVDSDYEVFSETIFLQNMVYQPIEERNA--FFQLTKDEDNSFNPENSVILLNEPSDN-SEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRKTKNPKLIEY---------SQQDFYPLKNGDIIMSKEGDQWLIEIQSKALKRFLKDQN-----DKDRQIQTFTFNDTKTQIAQIKG-------------KISSYVYTTNNGSLSLRPFYESFLL--------------EKKS-DNVYTIENKALDTMEISKC-QMVLKKHSTDKLDSQHKAISIDLDFKKE-RFKSDTELFLECLKES--- |
| 3WJ9 Chain:A ((3-412)) | QKSQFAYRSSKSIGLVNASENYASPPKFEAISEPARNACYSPNGKLFAYATATQVVINDTESGAKLTQLPAANTYELGFSPLGKYLSTWERPGKEADGTPKQNMKVWN-----TET---GQLVFSFVQRNQTGWNLQYTCDESLAARLVTNEVHFYE-TGNMSKGPIAKLRVEGISDFALSPGQNHAVAVFIPEKKGAPASVRTYSIPNFNSPLSQKTFFKADKVQFKWNALGTSLLVLTQDKSNKNYYGETTGQFDLDREGPIHDVCWNADSKEFGIVYGYMPAKTAIFDNRANVVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDAANNMKKITTVEAANCTYCEFSPDSQFLLTAVTSPRLRVDN-SIKIWHITGAPMFYEEFNELYQAFWRPRPLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51499 for 1901 contacts (27.1/contact) +
2D Compatibility (PS) -29874 + (NN) 1262 + (LL) 880
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: 8567.0 ( 4.51 by residue)
QMean score : 0.064
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