Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFDYEDVQLIPNKCIVNSRSECDTTVI--LGKHAFKMPIVPANMQTIINESIAEFLAENGYFYIMHRFNG-SARIPFVKKMKERQLISSISVGVKKEECLFVEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGET-KIENGIAYKEYFGSASE-------FQKGEKKNIEGKKIWIQHKGSLKNTLIEMHQDLQSSISYAGGRDL-EAIRKVDYVIVKNSIFNGDTI |
| 3R2G Chain:A ((10-326)) | -----FDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFKKCKGPVFVS---VGCTENELQRAEALRDAG--ADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGV--PMLTCIQDCSRADRS-IVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRKLNYVIVTQAGR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R2G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168817 for 2543 contacts (-66.4/contact) +
2D Compatibility (PS) -33897 + (NN) -11686 + (LL) 420
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -237280.0 ( -93.31 by residue)
QMean score : 0.518
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