Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MDSKKPHYRVSLSEQALNHEKLMRAIVKNLAD------------TPMVLK-GETALYLGY-GLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDT-DSVGRYMVRYATKDNKEEQT-------------LKL-EISYRDA----------------PKESEVNVIEGMRIAKIER-IIDNKLCACFDGE---------------------------HTRTKARDLFD-LHFL------AKHYEEHFNLDLASRLKDFSKDPDKLVSDYLVDVK-----LDALLNQI----------------MDLEETALELGVMAQLIH--KK-LEKQSHSL--NALQEQQGYSNNDNSLDNSNENTYTPKRRR |
| 4OL8 Chain:A ((24-461)) | PVWLQQKYREIIRNDLPPPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPITEKQDKAIDKLKDAPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLEYPAGELELLGIIKALHHFRYMLHGKHFTLRTNHARRVQRWLDDLATYDFTLEY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21255 for 1396 contacts (-15.2/contact) +
2D Compatibility (PS) -26532 + (NN) 1577 + (LL) 420
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -58340.0 ( -41.79 by residue)
QMean score : 0.256
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