Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTLIERLEKVTNSKELEEARLNALGKKGVFADKFNQLKNLNGEEKNAFAKEIHHYKQAFEKAFELKKKAIMELELEERLKKEKIDVSLFNA-IKTSSSHPLNYTKNKIIEFFTPLGYKLEIGSLVEDDFHNFSALNLPPYHPARDMQDTFYFKDHK---------------LLRTHTSPVQIHTMQEQTPPIKMICLGETFRCDY-DLTHTPMFHQIEGLVVDQKGNIRFTHLKGVIEDFLHYFFG-GVKLRWRSSFFPFTEPSAEVDISCVFCKQEGCRVCSHTGWLEVLGCGMVNNAVFEAI-----------GYENVSGFAFGMGIERLAMLTCQINDLRSFFETDLRVLESF |
| 2AKW Chain:A ((1-262)) | -----------------------------------------------------------------------------------RVDVSLPGASLFSGGLHPITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPMQVRYMVAHTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGE--GIAMAHLKGAIYELAQALFGPDSKVRFQPVYFPFVEPGAQFAVWW----PEGGK------WLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGIPDIRYFFGGRLKFLEQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163154 for 1791 contacts (-91.1/contact) +
2D Compatibility (PS) -24020 + (NN) -1182 + (LL) 7928
1D Compatibility (HY) -25600 + (ID) 5450
Total energy: -211478.0 ( -118.08 by residue)
QMean score : 0.441
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