Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCE--D----FESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDF--VQ-MTNN-HWT-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 1Z6R Chain:A ((81-395)) | --ETEAWHYLSLRISRGEIFLALRDLS-SKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKK-LERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGV-PVYIQHDISAWTMAEALFGAS----------RGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYG-K-------RCYCGNHGCLETIASVDSILELAQLRLNQSMSSM--L-HGQPLTVDSLCQAAL-RGDLLAKDIITGVGAHVGRILAIMVNLFNPQ-KILIGSPLSKAADILFP--VISDSIRQQA-LPAYSQHISVESTQFSNQGTMAGAA-LVKDAMYNGSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154428 for 2544 contacts (-60.7/contact) +
2D Compatibility (PS) -31179 + (NN) -7075 + (LL) 2512
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -196720.0 ( -77.33 by residue)
QMean score : 0.339
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