Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRID-----KDYKKQVVELKGHIPFKDSFKEETLE----NFTNL---LKEHRITPSYKTDIESVKKEGELFKITTT--------------SNTTYHAKFVVVAIGKMGQPNRPTTYK--IPVALSKQVVFSINDCKENEKTLVIGGGNSAVEYAIALCKTT-PTTLNYRKKEFSRINEDNAKNLQEVLDNNT---LKSKLGVDIESLEEDNTQIKVNFTDNTSE-----SFDRLLYAIG--GSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 1ZDL Chain:A ((31-353)) | ---QSFDLLVIGGGSGGLACAKEAAQLG-KKVAVADYVEP-SPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATG--GRPRYPTQVKGALEYGITSDDIFWLKE--SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN--QLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPK-NQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSST |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -63783 for 2128 contacts (-30.0/contact) +
2D Compatibility (PS) -29122 + (NN) 1591 + (LL) 904
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -108360.0 ( -50.92 by residue)
QMean score : 0.296
|
|
|