Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDFLKAFKDAFPHTISI-FLGYLLMGMTFGMLLAQQGYD-----YKVALFMSLFIYAGAI---------QFVAITLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHAL--TDETFA-LLNLYAPKKGVNETDFMFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFM-EQYKRNTNHKNAWL--------GIAIAV------VCLALFGTEYFLLIALVL--------MVLALILFRKQLEC |
| 1HD8 Chain:A ((3-262)) | -----LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG---------------NLKPGMQVPVSQLIRDINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFN--G----IRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237638 for 1620 contacts (-146.7/contact) +
2D Compatibility (PS) -20756 + (NN) 2153 + (LL) 3044
1D Compatibility (HY) -2800 + (ID) 1650
Total energy: -257647.0 ( -159.04 by residue)
QMean score : 0.174
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