Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTMNSVLECKELALYGGSFDPLHKAHLAIIEQTLELLPFVQLIVLPAYQNPFKKP-CFLDAKTRFKELERALKGMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRHLSSWTNAKELLKRVELVVFERIGYEEIQFKGRYHPLKGIDAP---ISSSAIRASLGV
2QTR Chain:A ((2-160))
----------RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGY---KLRTPY-PITTVEIPEFAVSSSLLRERYKE
General information:
TITO was launched using:
RESULT:
Template:
2QTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118029 for 1185 contacts (-99.6/contact) +
2D Compatibility (PS) -17090 + (NN) -11637 + (LL) 1264
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -158792.0 ( -134.00 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2QTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTR-query.scw
PDB file :
Tito_Scwrl_2QTR.pdb
: