Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVKGDTVGIICCSDGRKKEDENRIAL-LEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKTEQMG-YNYQLLHLVGKDSEL--------------------------QQSHFRKTFFENRVLISGEQL-NEFVWRG-----GEVIGGNIRCFLKLAGTNFMPDFTN-KIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCLIGAKVNVSRETLTNF |
| 4IIY Chain:A ((40-353)) | -LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKL---VSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPKIIIGYADTTALLAGIYAKTGLITFYGPALIPSFGEHPPLVDITYESFIKILTRKQSGIYTYTLPEKWSDESINWNENKILRPKKLYKNNCAFYGSGKVEGRVIGGNLNTLTGIWGSEWMPEIRNGDILFIEDSRKSIATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQIPVLDGFDCSHTHPMLTLPLGVKLAI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144601 for 2354 contacts (-61.4/contact) +
2D Compatibility (PS) -30074 + (NN) -12249 + (LL) 1220
1D Compatibility (HY) -18400 + (ID) 3800
Total energy: -207904.0 ( -88.32 by residue)
QMean score : 0.406
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