Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKKKKFRLFDAVLMAVCVVLVVESAAPAA----AIGSSQFFWWIALLILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRKWGARVAWLYWINYP-IWMASLAVLFVEVITQIFPVSFGTPVSILIQLIFVWIVVIVSCYPVSDSKWILNIAAFCKVAIML-CLGVLGIYFAITKGL-A----ND-FS--GK--A-LL----PTF-D-LES---LSFI-SVILFNFLGFEVVTTLASDMENPKKQIPQAIIYGGILIAFFYLLAAFGMG---AAIPTSE---------------LS-TSGGLIDSFIMLIGGVNPFVIIIGIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNDMPTGTSILNGIVASVLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKLDPDRERPFKVPGGKILLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTIVAVIVGEICIWLAGKRKDKGEIKNEND |
| 3DH4 Chain:A ((53-355)) | ---GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAIT-LIIVGKYFLPIFIEK-GIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG--IPLM--YSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTY-MAVSF-IGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSV-SEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLT-QF-LP-VGVKGVVFAALAAAIVSSLASMLNSTATIFT---MDIYKE-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131530 for 1583 contacts (-83.1/contact) +
2D Compatibility (PS) -25305 + (NN) 2307 + (LL) 14492
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -142686.0 ( -90.14 by residue)
QMean score : 0.074
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