Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAECFVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIESVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYRQAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDINLYIFTDEIEM-NN-----L--DITSRISTIAIMELILYQFMEDETSSF |
1VIM Chain:A ((15-183)) | -----------------------------------------------------------------------------------------LRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETV-----TPRITDQDVLVGISGSGETTSVVNISKKAKDIGS-K-LVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78814 for 1292 contacts (-61.0/contact) +
2D Compatibility (PS) -17342 + (NN) -8266 + (LL) 8288
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -104034.0 ( -80.52 by residue)
QMean score : 0.640
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