Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
| 2LQ2 Chain:A ((1-30)) | -------------------------------------------------------------------------------------------------------------------------------------------------VKGRIDAPDFPSSPAILGKAATDVVAAWKS----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6164 for 120 contacts (51.4/contact) +
2D Compatibility (PS) -3197 + (NN) -1826 + (LL) 22540
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 22331.0 ( 186.09 by residue)
QMean score : 0.555
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