Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQLMIFMIIRVFYFAIFYLLENEILVTAQFITNAYITLCIIWVISFAIFSFRFKKKLDKGGYRKDSKLQQKRSNLGLNLSKGTYFLILGSFGLFILIRMLIGGELEEIIISLFLIVCILIGIAGVSLFPEHLFTAYCKFNFKEFHIEE
1GPN Chain:A ((295-342))
-------------------------------------------VIDGEFFPTSLESMLNSGNFKKTQIL------LGVNKDEGSFFLLYGAPGF-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GPN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4613 for 170 contacts (-27.1/contact) +
2D Compatibility (PS) -4651 + (NN) 1542 + (LL) 12068
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -1204.0 ( -7.08 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_1GPN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GPN-query.scw
PDB file :
Tito_Scwrl_1GPN.pdb
: