Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYLNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSA--MILVFGDLQN-FENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA
3GE5 Chain:A ((31-172))
--------EDFFRTRRSVRKFIDR-PVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREEEGRKRLAPC----SQQPWFPGAPIYIITLGDHQRAWKRGA---GDSVD---------------------------------IDTSIAMTYMMLEAHSLGLGCTWVCAFDQALCSEIFDI-PSHMTPVSILALG---------------------
General information:
TITO was launched using:
RESULT:
Template:
3GE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73497 for 1013 contacts (-72.6/contact) +
2D Compatibility (PS) -15471 + (NN) -9057 + (LL) 5592
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -106433.0 ( -105.07 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3GE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE5-query.scw
PDB file :
Tito_Scwrl_3GE5.pdb
: