Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPHLLRNGFLEEPQFEPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQDVAVMMDLPYEIAQFKRIKKRAVLELATLMGILVRK
1RP3 Chain:A ((172-234))
-----------------------------------------------------------------------RELTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN----
General information:
TITO was launched using:
RESULT:
Template:
1RP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27086 for 388 contacts (-69.8/contact) +
2D Compatibility (PS) -6916 + (NN) -6326 + (LL) 6576
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -36702.0 ( -94.59 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1RP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RP3-query.scw
PDB file :
Tito_Scwrl_1RP3.pdb
: