Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVILKFGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD
1RKL Chain:A ((1-36))
------------------------------------------------MISDEQLNSLAITFGIVMMTLIVIYHAVDSTMSPKN--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3812 for 140 contacts (-27.2/contact) +
2D Compatibility (PS) -4063 + (NN) -3245 + (LL) 8888
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -4582.0 ( -32.73 by residue)
QMean score : -0.001
(partial model without unconserved sides chains):
PDB file :
Tito_1RKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RKL-query.scw
PDB file :
Tito_Scwrl_1RKL.pdb
: