Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDIVLLNATREMQDFVAET---AIKQINQLG-GRFSISINI-PAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV |
3GFX Chain:A ((182-394)) | ---------------------QAIVEPAKKRVSSFEALIRSPTGGS---PVEMFAAI----AAEDRYRFDLESKAYAFALAGQLPLGKHQLAINLLPGSLYHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRP------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63938 for 1605 contacts (-39.8/contact) +
2D Compatibility (PS) -22326 + (NN) -7778 + (LL) 4140
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -110002.0 ( -68.54 by residue)
QMean score : 0.460
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