Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDIVLLNATREMQDFVAET---AIKQINQLG-GRFSISINI-PAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV
3GFX Chain:A ((182-394))---------------------QAIVEPAKKRVSSFEALIRSPTGGS---PVEMFAAI----AAEDRYRFDLESKAYAFALAGQLPLGKHQLAINLLPGSLYHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRP-------------


General information:
TITO was launched using:
RESULT:

Template: 3GFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63938 for 1605 contacts (-39.8/contact) +
2D Compatibility (PS) -22326 + (NN) -7778 + (LL) 4140
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -110002.0 ( -68.54 by residue)
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_3GFX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFX-query.scw
PDB file : Tito_Scwrl_3GFX.pdb: