Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKTIIKRVLQIIP-MLFIISIISFA-LIKL------APGDPVNSFVTPD-M-----NPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYY--RYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWP-GMG-SLGINAIFQLDYPVIMAITLFSALL-LIIGNLLADL-AYMIVDPRIRE-MG- |
| 4RWR Chain:A ((55-323)) | VYREKQKKV-ESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQW---------GN------NYENNLKKIEEAVSKTAGQ---------VLTYEGKPISASFFSTSNGRTENAADYWGNDYP-----------------YLKS-------VDSPWDQASPKFTSEQIFTVADFQKRLGVKVLADGKVGDIKGR----TEGKRVKDVAFQGKTLTGRDVRDKLELRSSDFTWKQEGDKIVVTTKGFGHGVGMS------------------QYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139402 for 1838 contacts (-75.8/contact) +
2D Compatibility (PS) -25445 + (NN) 4580 + (LL) 6908
1D Compatibility (HY) -1200 + (ID) 2500
Total energy: -157059.0 ( -85.45 by residue)
QMean score : 0.161
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