Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK
3T98 Chain:A ((462-494))
-----------------------------------------LLREIKQHLKQQQEGLSHLISIIKDDLEDIKLV--------------------
General information:
TITO was launched using:
RESULT:
Template:
3T98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -840 for 123 contacts (-6.8/contact) +
2D Compatibility (PS) -3333 + (NN) -34 + (LL) 3308
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -3449.0 ( -28.04 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_3T98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T98-query.scw
PDB file :
Tito_Scwrl_3T98.pdb
: