Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEQEIIEKVEILPNNFSENDSIYISQENIKNLVLFSKENQTVLELLITPFLICVNSGLKYELHYYEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFVRREDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL
2KNZ Chain:A ((12-33))
------------------------------------------------------------------------------------------------------------------QQQLEQLNSMGFINREANLQAL-----------
General information:
TITO was launched using:
RESULT:
Template:
2KNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6190 for 112 contacts (-55.3/contact) +
2D Compatibility (PS) -2382 + (NN) -1008 + (LL) 9284
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -2146.0 ( -19.16 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_2KNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KNZ-query.scw
PDB file :
Tito_Scwrl_2KNZ.pdb
: