Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKFDLENGYVVKADGEMLVGGKFVVFKDSMKNWEPPYEN--KKLSESEVQEIIQQVKQSTNENTVQISFE
2I9X Chain:A ((47-85))
----------------------FVAMPSKRTPDG-EFRDIAHPINSDMRQEIQDAVMKVYDE--------
General information:
TITO was launched using:
RESULT:
Template:
2I9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5548 for 149 contacts (37.2/contact) +
2D Compatibility (PS) -3837 + (NN) -602 + (LL) 1732
1D Compatibility (HY) -800 + (ID) 350
Total energy: 1691.0 ( 11.35 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2I9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9X-query.scw
PDB file :
Tito_Scwrl_2I9X.pdb
: