Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWVLMKNGIVDVEATNAYNAAVLGGKMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFSIISGVIFYYAGGGYKGKKIKIPKKWLDRRRNVNRIDFLQSVNIKDFVVKDKHLRNSTAKRARKFDAETSEEANLIVQDALKNGKVKKIEDNGLGSQRQKSYSAIIDTEKNVGTKGESHIKIVYDELNNVWTVYPVPAP |
| 4USP Chain:A ((19-83)) | ---------------------------------------------------------------------------------------------------------------------------------------LSAGNYIIYNRVLSPRGEKLALTYPGRQRTPVTVSPLD-----GSSEQAWILRSYDSNSNTWTISPVGSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14729 for 354 contacts (41.6/contact) +
2D Compatibility (PS) -7225 + (NN) -2262 + (LL) 9572
1D Compatibility (HY) -800 + (ID) 850
Total energy: 13164.0 ( 37.19 by residue)
QMean score : 0.176
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