Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDQKIKDIYHIDDSFSIDNEKYNKWLKSLLNKTRGEITENDVYTMLLQQELEDLAIEKAIEFIKIDPLAGEMWDGQFLEQLAGISVDKLVAYKEELQKLIPYMDNQINEILWDFETEKEEFLFRYAKFKDKVANL
4O1L Chain:A ((207-233))
-------------------------------------------------------------------------------------------YKESLMKVMPYVD-----ILFGNETEAATF--------------
General information:
TITO was launched using:
RESULT:
Template:
4O1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3036 for 96 contacts (-31.6/contact) +
2D Compatibility (PS) -2838 + (NN) -1808 + (LL) 8832
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -3150.0 ( -32.81 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_4O1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O1L-query.scw
PDB file :
Tito_Scwrl_4O1L.pdb
: