Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIGVFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPL-STGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWATGNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIGGTMIGIAKS |
| 3B5D Chain:A ((28-105)) | -------------------------------------------------------TRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVL-ISLLSWGFFGQRLDLP----AIIGMMLICAGVLIINLLS---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278339 for 2346 contacts (-118.6/contact) +
2D Compatibility (PS) -6663 + (NN) 4072 + (LL) 16652
1D Compatibility (HY) -4800 + (ID) 250
Total energy: -269328.0 ( -114.80 by residue)
QMean score : ?
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