Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADGKAL-DEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAG-GDAPDAF-ELNYETFMQYAEKGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQ----PVTMNEFYKVAAQNGGSIFNEDLTETTINSPENVEALTHLTNEVTDSKV-----APSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMFQDAPFKWDVQVEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSANEEAAKIRIDNNWELPATENKEILQPYLDATPPD-------NREAVFESLQYMVLPPVVKDW------NKISDYTNSEFEKVLNGDSTPEKALKNSEDNINKTMGFK |
| 4C1T Chain:A ((18-412)) | ----------------------------DDKTITFWHNASAGEGRQYWENLAKSFEEANPGTKVEIQAIQNEDFAGKLQTAMQDPASGPDVFMSLGGAKTKEMIDAGQVMDLTDKISDTVKTD----MKTTLSAATFDGKVYGVPVSVEPGGMWYSKDLFKKAGVSDVPA--TYEELLADAKKLKDSGTDAIALGAKDAWPAAHWYYWLVLRECSPEVYDKSVQDHDFSNACWVNAGKKL-QELKDLKVFNDGFLTTTAQQGANSSAGLLANHKAAMELMGAWEPGVLKDLTPDQKPMADLG-------FFAF-PEVAGGEGEPGALMGGVTYFCVNPKASQTSIDFVNYMGEKKNQEDYAKAFSTIPASEPARAVVTDESLKQVIEYLDKAPSMQLWMDTALGTNIGNALNAAVVNMLSGQGSPEDIVKAMQDAAQK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22644 for 3160 contacts (7.2/contact) +
2D Compatibility (PS) -40282 + (NN) -22560 + (LL) 2228
1D Compatibility (HY) -10000 + (ID) 4800
Total energy: -52770.0 ( -16.70 by residue)
QMean score : 0.368
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