Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MNVLQSMKMAWKQLKASKLRSFLTMLGIII-----------------------GVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVK----SVSP---------ELSGQVNATFDYKNS-----SNKVIGTN----DQYKAARS---LEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVL--------KEKGASMMGSSDDQIF----------------IPISSAQRLLKDTNVRT-IYVETKSAEDV-----DFVVNTL------ESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQE--ILNAFNTISTTLTTALGAIAAISL-----VVGGIGIMNIMLVSVSERTREIGIR------------------KALGAKKRAILL----QFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSF--VFSLCIGVIFGIAPANKASKLRPIDALRSE |
| 4C3X Chain:A ((23-530)) | DWTSECDVLVVGSGGGALTGAYTAAAQGLTTIVLEKTDRFGGTSAYSGASIWLPGTQVQERAGLPDSTENARTYLRALLGDA-ESERQDAYVETAPAVVALLEQ--NPNIEFEFRAFPDYYKAEGRMDTGRSINPLDLDPADIGDLAGKVRPELDQDRTGQDHAPGPMIGGRALIGRLLAAVQSTGKAELRTESVLTSLIVEDG---RVVGAEVESG--------GETQRIKANR----GVLMAAGGIEGNAEMREQAGTPGKAIWSMGPFGANTGDAISAGIAVGGATALLDQAWFCPGVEQPDGSAAFMVGVRGGLVVDSAGERYLNESLPYDQFGRAMDAHDDNGSAV--PSFMIFDSREGGGLPAICIPNTAPAKHLEAGTWVGADTLEELAAKTGLPADALRSTVEKFNDAAKLGVDEEFHRGEDPYDAFFCPPNGGANAALTAIENGPFYAARIVLSDLGTKGGLVTDVNGRVLRADGSAIDGLYAAGNTSASLSGRFYPGPGVPLGTAMVFSYRAAQDMAK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115645 for 2937 contacts (-39.4/contact) +
2D Compatibility (PS) -38558 + (NN) 5493 + (LL) 1744
1D Compatibility (HY) -4000 + (ID) 4350
Total energy: -155316.0 ( -52.88 by residue)
QMean score : 0.149
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