Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
3ELC Chain:A ((7-162))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIK
General information:
TITO was launched using:
RESULT:
Template:
3ELC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105514 for 1295 contacts (-81.5/contact) +
2D Compatibility (PS) -17199 + (NN) -9763 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 4850
Total energy: -151118.0 ( -116.69 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3ELC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ELC-query.scw
PDB file :
Tito_Scwrl_3ELC.pdb
: