Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHTLHRETK
3VHS Chain:A ((8-17))
----------------------------------QCPVCQQMMP-----
General information:
TITO was launched using:
RESULT:
Template:
3VHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -366 for 29 contacts (-12.6/contact) +
2D Compatibility (PS) -989 + (NN) 296 + (LL) 2456
1D Compatibility (HY) 0 + (ID) 100
Total energy: 1297.0 ( 44.72 by residue)
QMean score : 0.821
(partial model without unconserved sides chains):
PDB file :
Tito_3VHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VHS-query.scw
PDB file :
Tito_Scwrl_3VHS.pdb
: