Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKMRFFQSVQFKLVIMYLLLIIVAMQVIGAYFVRELEGQLEKNFQDSITNSITLLDYNAREEIIKNSDNSVKLQNDIRELLVDYSRASSNLIEVRIVDDKGKILGTSNLNNQGIVGQKSNDPLVKRTLSLGTTSEDKIYKDESNKNNRVWVNVSSIKNKGQVIGAIYLVADIESVYKQVDDITNIFITGTLIAMIITAVLGILLSRTITKPIVEMKRQAYAMARGNYSRKVKVYGVDEIGELADSFNTLTKRVQEAQAMTEGERRKLSSVLAYMTDGVIATDRRGKVILINTPAEKMLRVKHESANGRSIIDVLDIGDTYQFEDLMEVDGSLTMDRSTLDKPYVLRANFSVIQRETGFNNGVIAVLHDITDQEKVDQERRDFVSNVSHELRTPLTSMHSYLEALSDGAWEDKEIAPRFLEVTQNETERMIRLVNDLLKLSRMDGGREQLEKSFVNFTDFFNHIIDR--FEM---MKKETIMFKRHIPREPVIIEIDEDKVMQVLDNIISNANKYSPDGGRISFYLKKFEDEIEVSIADEGLGVPDEDLANVFDRFFRVDKARSREMGGTGLGLAIAREVIEAHGGRIWAERNKNKGTIIKFTLPYSDLPEDDWE |
| 4CB0 Chain:A ((66-293)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNQMVTALERMMTSQQRL-------LSDISHELRTPLTRLQLGTALLRRRSGESKE-----LERIETEAQRLDSMINDLLVMSR-NQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNF----PPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDK--DGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55758 for 1604 contacts (-34.8/contact) +
2D Compatibility (PS) -23729 + (NN) -6942 + (LL) 29332
1D Compatibility (HY) -11600 + (ID) 4050
Total energy: -72747.0 ( -45.35 by residue)
QMean score : 0.387
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