Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADA-----------NKLEVTFTNG--KKSEAKLLGTDEWNDLAVLEID-DKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTN---GDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISMENVE-GISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQY-----------DVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT |
4IC6 Chain:A ((27-356)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEGRIVQLFEKNTYSVVNIFDVTLRP------------GNGSGVVW---DGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFG--FDHTLTVGVISGLNRDIFSQTGVTIGGG--------IQTDAAINPGNAGGPLLDSKGNLIGINTAIFTQTGTSAGVGFAIPSSTVLKIVPQLIQFSKVLRAGINIELA---PDPVANQLN-------VRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVLGDIIVAVDDKPVKNKAELMKIL--DEYSVGDKVTLKIKRGNEDLELKISLE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82111 for 2422 contacts (-33.9/contact) +
2D Compatibility (PS) -30760 + (NN) -838 + (LL) 7592
1D Compatibility (HY) -24000 + (ID) 5950
Total energy: -136067.0 ( -56.18 by residue)
QMean score : 0.510
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