Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTTIQQLVKHVSVREFKNERLSDETKQHLLTAARSASSSHFVQSFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRNMESLLVSVIDATIAAQNMVIAAESLDLGICYIGGIRNDIGKVAELLNLPPFTIPVFGLTVGVPEYKNQVKPRLLLENQVGENQYPHEQFTDLKAYEELTKDYYALREKNQHQTSWGDKNVEFFEEIRRPEIASFLKKQGFTLD |
| 1F5V Chain:B ((1-238)) | MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGL-----AEQLLLGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQGWA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83634 for 1723 contacts (-48.5/contact) +
2D Compatibility (PS) -25824 + (NN) -13610 + (LL) 48
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -146820.0 ( -85.21 by residue)
QMean score : 0.535
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