Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIIVMLTIFTAVLVVGCSGTGTADKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTLNDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNYSKYVTEQVDEFVAQTEIFTNAVKSGDIEKAKAAYVSPRLNYERIEPIAESFGDLDPKIDARINDVENEADWTGFHVIERALWEKKSLEGMDVYADKLLTDAKALQAEVKNL-----K-----------------LEPKPMVAGAMELLNEAATTKIT----------------GEEEAYSHTDLDDLNANVEGSKVVYQ----------AIIPALNAQDKKLADQIDAAFNKMEDTLANYKNGDSFVLYTT-LTKDQIRDISDQLSHLSELMAQTGKIF |
3OYV Chain:A ((26-208)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYMRNVAALLKTDATNLYNAWNSSYKGGESYASLFKAHSGSPYASALSCVEEIVDKCAEIANEVGTAKIGDPYNLYKAGNTEEALYAVESWYSWHSRDDYTNNIYSIRNAYYGSLDGNINANSLSTVIAGANSSLDTKIKNAIQKAAKAIQDIP-----QPFRNHIPSNETVAAMDACAELESILKND---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24519 for 902 contacts (-27.2/contact) +
2D Compatibility (PS) -14289 + (NN) -3872 + (LL) 16692
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -31738.0 ( -35.19 by residue)
QMean score : 0.588
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